There are 431 pathways currently in the PGDB. Of these, 418 pathways were previously inferred and their status has not changed. The remainder are either newly inferred or require(d) manual confirmation for the various reasons stated below. Pathways in the lists below that are marked with an X have been interactively deleted. All other pathways in the various lists below were present in the PGDB at report generation time. This report was generated on 24-May-2012 16:50:34. 0 Pathways that were previously deleted manually now have evidence for additional or different reactions. 3 Pathways that were previously inferred but which now would be pruned. You will probably want to delete most or all of these. LYSINE-DEG1-PWY lysine degradation II PWY-6316 aromatic polyketides biosynthesis PWY-6537 4-aminobutyrate degradation II 0 Pathways that were added since PathoLogic was last run but which now would be pruned. You should consider deleting most or all of these. 10 Pathways are not present in MetaCyc. If any of these pathways have been created specifically for your organism and have experimental evidence and comments, please consider submitting them for inclusion into MetaCyc. If not, these are probably pathways that have been deleted from Metacyc (and possibly replaced with others). You should consider carefully whether these pathways should be kept or deleted. GALACTMETAB-PWY GALACTMETAB-PWY PWY-3921 PWY-3921 PWY-4541 PWY-4541 PWY-4562 PWY-4562 PWY-5805-ARA PWY-5805-ARA PWY-5868 PWY-5868 PWYQT-4432 PWYQT-4432 PWYQT-4436 PWYQT-4436 PWYQT-4437 PWYQT-4437 PWYQT-4470 PWYQT-4470 0 Pathways have been newly inferred in this organism. You should check the list for false positives, but otherwise you will want to keep most of these.