Gramene Documentation

Web Site Help Documents - These files provide information about the module, and how to conduct a search, as well as discuss search results and offer term definitions. Genomes BLAST Maps Markers Proteins Ontologies Genes QTL Pathways Diversity Quick Search Help - The "Quick Search" is located at the top of each Gramene page. Optionally, you may choose to go to a module search, as instructed above in the help documents. FAQs provide answers to common questions asked by users. There are questions pertaining to each module, as well as about the program and data curation in general. FAQ's describe typical searches conducted in each module.

Release Notes Glossary Rice Gene Nomenclature Standard Operating Procedures Documentation on In Silico Mapping External Use Linking back to Gramene Installing Gramene

Tutorials Tutorials explore individual modules and all the functions.

Exercises Exercises answer biological questions often using multiple modules.

Select your preferred format: Gramene Navigation Overview of Modules Genomes GrameneMart BLAST Maps Mappings (incl. Markers) Proteins Ontologies Genes & Alleles QTL Diversity Pathways Literature     PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial PowerPoint Tutorial     Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial Adobe PDF Tutorial

RiceCAP 2006 Workshop (6/06) Conducting searches. QTL and markers. Introduction to Diversity and Pathway databases. Exercise in Power Point or MS Word. RTWG 2006 Workshop (2/06) Gramene workshop for new and novice users. Example of a database search on the Pi-ta gene in PDF Exercise - Milling Yield in PDF Cereal Genomics Workshop (9/05) Gramene Exercises 1 & 2 in MS Word questions only Exercise 1 with answers - Searching and Ontology Exercise in PDF Exercise 2 with answers - Comparison Exercise in PDF RCN Workshop: Development and Implemention of Ontologies in the Database (1/05) Gramene's ontology exercise (Download in PDF format | MS-Word format)

If you do not have software to view the tutorials, you can obtain free software for viewing these formats.

Free associated software:

PowerPoint viewer