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DATA SUMMARY

RICE DATABASE

Species: Oryza sativa, O. glaberrima, O. rufipogon
Data type: SSR, RFLP, and phenotype data and passport descriptions
Germplasms with genetic data: 954 accessions plus 627 BC2F1/F2 lines
Germplasms with phenotype data: 532 BC2F1/F2 lines in multiple locations for 21 traits
Total No. Loci: 782 SSRs and 241 RFLPs (Note: All loci are not necessarily unique.)
Project website: Part of the data was obtained from McCouch Lab

 

MAIZE DATABASE

Species: Zea spp.
Data type: SSR, SNP, sequence, and phenotype data and passport descriptions
Germplasms with sequence data: 229
Germplasms with SNP data: 449
Germplasms with SSR data: 1544
No. of loci with sequence data: 3683
No. loci with SNP data: 1435
No. of loci with SSR data: 520
Project website: Molecular and Functional Diversity of the Maize Genome

 

WHEAT DATABASE

Species: Triticum aestivum, Aegilops spp.
Data type: SNP and sequence data and passport descriptions
Total. no. of germplasms: 48
Total SNP markers: 3802
Total sequence assays: 3802
Project website: Haplotype Polymorphism in Polyploid Wheats and Their Diploid Ancestors