Gramene Markers Statistics

Module Statistics Home: Genomes | Maps | Markers | QTL | Diversity | Genes | Proteins | Pathways | Ontologies
Database Statistics for Markers

Markers Database Statistics
Deletion 895 Insertion 686 Other_DNA 30,601

V24
March 2007 V23
November 2006 V22
September 2006 V21
May 2006 V20
March 2006 V19
October 2005

By Marker Type

AFLP 8,150 8,039 1,230 950 950 950

BAC end sequence 850,566 676,959

Breakpoint Interval 303 303

Centromere 49 49 12 12

Clone 2,561,808 2,312,107 2,390,592 2,033,658 1,028,678 602,304
EST 4,459,675 4,417,532 3,675,648 3,675,691 2,553,444 2,530,661

EST Cluster 1,325,127 1,325,127 1,325,059 1,325,059 614,790 601,935

FPC 22,651 19,339 1,701

Gene 9,764 9,321 8,673 8,474

Gene Model 95,297 57,753 57,501 57,503

Gene Primer 19 19 19 19 19 19

GSS 4,750,481 4,412,241 4,312,690 4,605,001 1,099,874
maizebin 100 100

mRNA 142,037 99,536 98,737 99,054 97,823 91,074
Overgo 16,964 16,496 15,575

Primer 5,398 4,206 62 34 34 34

qtl 11,210 10,962

RAPD 174 174 133 135 135 135

RFLP 17,739 17,718 19,643 7,822 10,366 7,791

SSR 14,762 14,748 16,885 16,835 16,835 16,835

SSR Primer Pair 16,883 16,884

STS 2,234 2,234 2,213 65 65 65

Tos17 18,023 18,023

Undefined 68,879 68,872 5,621 1,817 1,798 823

By Species

Barley (Hordeum spp.) 682,030 681,567 638,042 637,879 535,720 535,720

Maize (Zea spp.) 4,630,429 4,590,524 4,044,148 3,365,983 2,622,201 1,089,433

Oat (Avena spp.) 8,840 8,836 8,232 8,226 8,214 8,215

Rice (Oryza spp.) 5,014,771 4,339,739 4,412,024 4,395,144 1,651,820 1,475,049

Rye (Secale spp.) 13,512 13,412 13,346 13,346 13,260 13,258

Sorghum (Sorghum spp.) 1,293,109 1,293,104 1,265,320 1,401,556 286,321 260,734

Sugarcane (Saccharum spp.) 340,032 340,021 339,661 339,661 339,657 339,647

Wheat (Triticum spp. + Aegilops spp.) 1,345,415 1,315,655 1,063,010 1,062,830 798,051 787,313

Other 233,735 230,903 148,316 129,009 38,146 38,045

Mappings on gt0506 TIGR Assembly

Chr. 1 4,547,505 4,521,755

Chr. 2 4,038,091 4,017,106

Chr. 3 4,271,553 4,247,474

Chr. 4 4,513,339 4,497,393

Chr. 5 4,168,525 4,153,507

Chr. 6 3,738,840 3,724,562

Chr. 7 4,071,478 4,057,685

Chr. 8 3,710,265 3,698,165

Chr. 9 3,463,343 3,454,027

Chr. 10 3,413,829 3,404,325

Chr. 11 3,253,010 3,243,624

Chr. 12 3,430,643 3,420,962

Chr. chloroplast 186

Chr. mitochondrion 108

None 4,688,177

	V24 March 2007	V23 November 2006	V22 September 2006	V21 May 2006	V20 March 2006	V19 October 2005
By Marker Type
AFLP	8,150	8,039	1,230	950	950	950
BAC end sequence					850,566	676,959
Breakpoint Interval	303	303
Centromere	49	49	12	12
Clone	2,561,808	2,312,107	2,390,592	2,033,658	1,028,678	602,304
EST	4,459,675	4,417,532	3,675,648	3,675,691	2,553,444	2,530,661
EST Cluster	1,325,127	1,325,127	1,325,059	1,325,059	614,790	601,935
FPC	22,651	19,339	1,701
Gene	9,764	9,321	8,673	8,474
Gene Model	95,297	57,753	57,501	57,503
Gene Primer	19	19	19	19	19	19
GSS	4,750,481	4,412,241	4,312,690	4,605,001	1,099,874
maizebin	100	100
mRNA	142,037	99,536	98,737	99,054	97,823	91,074
Overgo	16,964	16,496	15,575
Primer	5,398	4,206	62	34	34	34
qtl	11,210	10,962
RAPD	174	174	133	135	135	135
RFLP	17,739	17,718	19,643	7,822	10,366	7,791
SSR	14,762	14,748	16,885	16,835	16,835	16,835
SSR Primer Pair	16,883	16,884
STS	2,234	2,234	2,213	65	65	65
Tos17					18,023	18,023
Undefined	68,879	68,872	5,621	1,817	1,798	823

By Species
Barley (Hordeum spp.)	682,030	681,567	638,042	637,879	535,720	535,720
Maize (Zea spp.)	4,630,429	4,590,524	4,044,148	3,365,983	2,622,201	1,089,433
Oat (Avena spp.)	8,840	8,836	8,232	8,226	8,214	8,215
Rice (Oryza spp.)	5,014,771	4,339,739	4,412,024	4,395,144	1,651,820	1,475,049
Rye (Secale spp.)	13,512	13,412	13,346	13,346	13,260	13,258
Sorghum (Sorghum spp.)	1,293,109	1,293,104	1,265,320	1,401,556	286,321	260,734
Sugarcane (Saccharum spp.)	340,032	340,021	339,661	339,661	339,657	339,647
Wheat (Triticum spp. + Aegilops spp.)	1,345,415	1,315,655	1,063,010	1,062,830	798,051	787,313
Other	233,735	230,903	148,316	129,009	38,146	38,045
Mappings on gt0506 TIGR Assembly
Chr. 1		4,547,505	4,521,755
Chr. 2		4,038,091	4,017,106
Chr. 3		4,271,553	4,247,474
Chr. 4		4,513,339	4,497,393
Chr. 5		4,168,525	4,153,507
Chr. 6		3,738,840	3,724,562
Chr. 7		4,071,478	4,057,685
Chr. 8		3,710,265	3,698,165
Chr. 9		3,463,343	3,454,027
Chr. 10		3,413,829	3,404,325
Chr. 11		3,253,010	3,243,624
Chr. 12		3,430,643	3,420,962
Chr. chloroplast			186
Chr. mitochondrion			108
None			4,688,177