| Color code | Stage/Source | Annotation Level | Cycle Time | Browser |
|---|---|---|---|---|
| Preliminary sequences: HTGS_FULLTOP, HTGS_PREFIN, HTGS_ACTIVEFIN | GenBank record only | Weekly | CytoView | |
| Finished in genic regions: HTGS_IMPROVED | Primary Annotation: Gene prediction, EST/cDNA/GSS alignments, whole genome alignments, repeat annotation, displayed as tracks in ContigView | Weekly/Monthly | ContigView | |
| Finished in genic regions: HTGS_IMPROVED | Secondary Annotation: Additionally provides links to comparative maps (CMap), Orthologue/Paralogue/Synteny analysis (Compara), and protein sequence characterization (InterPro/GO). | Quarterly | ||
| Sequenced by external groups | Primary or Secondary Annotation (see above) as processing queues allow. | Quarterly |