OR_CB FPC: Feb 2006
Assembly
The Gramene Browser for Oryza rufipogon presents results from the Oryza MApping Project (OMAP).
This release is based on the OMAP FingerPrint Contig (FPC) map from Jan
2006, generated using the
OR_CBa BAC library. This map has undergone manual annotation whereby the
FPCs have, where possible, been anchored onto the organism's
chromosomes.
Annotation
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The 'base' data from the FPC map file consists of the locations of
FPContigs on chromosomes, and clones on FPContigs. These data form
the basis of the genome browser views.
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In addition to the 'base' data, syntenic spans between O.rufipogon
and O.sativa were estimated using the procedure outlined [here]
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A summary of the data available from within the genome browser can
be viewed [here]