==============================================================================
Gene Name of dwarf Linkage Chromo- Strain and Dwarf
symbol groups some backcrosses donor
==============================================================================
d-1 daikoku dwarf VI+IX 2 ID-1,B\11\ H-86(HK)
d-2 ebisu dwarf II 11 ID-2,B\9\ H-85(HK)
d-3,4,5 bunketsu-waito dwarf II,I,X 11,6,8 ID-3,B\5\ H-2(HK)
d-6 ebisumochi dwarf IV 10 ID-6,B\7\ H-127(HK)
d-7 heiei-daikoku dwarf IV 10 ID-7,B\9\ N-7(HK)
d-10 toyohikari-bunwai dwarf III 3 ID-10,B\9\ N-70(HK)
d-11 norin-28 dwarf II 11 ID-11,B\9\ M-17(HK)
d-12 yukara dwarf ID-12,B\7\ N-62(HK)
d-13 short grained dwarf ID-13,B\7\ M-15(HK)
d-14 kamikawa-bunwai dwarf XI 5 ID-14,B\10\ H-147(HK)
d-17(t) slender dwarf ID-17,B\8\ M-52(HK)
d-18h hosetsu-waisei dwarf III 3 ID-18h,B\10\ N-71(HK)
d-18k kotake-tamanishiki dwarf III 3 ID-18k,B\11\ F1-26(KY)
d-19 kamikawa dwarf ID-19,B\9\ N-56(HK)
d-27 bunketsuto dwarf VIII 9 ID-27,B\9\ F1-86(KY)
d-30 waisei-shirasasa dwarf X 8 ID-30,B\7\ F1-3(KY)
d-35(t) tanginbozu dwarf ID-35,B\10 N-77(HK)
d-42(t) liguleless dwarf II 11 ID-42,B\6\ M-341(HK)
sd-1 dee-geo-woo-gen dwarf III 3 ID-47,B\7\ I-120(IR)
==============================================================================
Reference; Kinoshita and Shinbashi (1982)
Institution; Plant Breeding Institute, Faculty of Agriculture
Hokkaido University, Sapporo, 060 Japan.
Strains: SC 2,3,4,5
Reference: Itakura et al. (1983).
Institution: National Agricultural Research Center, Yatabe, Tsukuba, 305 Japan.
3. Isogenic lines of Taichung 65 for marker genes
==============================================================================
Gene Character Linkage Chromo- Strain and Donor
symbol group some backcrossings
==============================================================================
wx glutinous endosperm I 6 E7=T65wx, 563(GI),Kinoshi
B\14\(GI,CH),B tamochi(CH)
\27\(RY)
fs-1 fine stripe-1 I 6 T65fs-
1,B\7\(RY)
Cl Clustered spikelets I 6 T65Cl,
B\9\(RY)
Ur-1 Undulated rachis-1 I 6 T65Ur-1,
B\3\(RY)
d-2 ebisu dwarf II 11 E16=T65d-2, H-79(HK)
B\8\(RY)
(GI,CH),B\9\(R
Y)
Pl Purple leaf II 11 T65Pl,B\6\(RY)
lg liguleless II 11 E8=T65lg,B\8\( H-79(HK)
GI,CH),
B\11\O(RY)
Ph Phenol staining II 11 E15=T65Ph, 414(GI),P.T.B-
B\8\(GI,CH) 10(CH)
d-11(d- norin-28 dwarf II 11 T65d-11,
8) B\3\(RY)
sd-1(d- dee-geo-woo-gen dwarf III 3 T65d- Taichung-native
47) 47,(CH),B\6\(R -1(CH)
Y)
A Anthocyanin activator III 3 T65A B\11(RY)
Rd Red pericarp III 3 T65Rd,(CH), P.T.B.-10(CH)
B\10\(RY)
Pn Purple node III 3 T65Pn,
B\11\(RY)
g-1 long sterile lemmas-1 IV 10 E-12=T65g-1, 868(GI)
B\8\(GI,CH),B\
14\(RY)
Rc Brown pericarp IV 10 E14=T65Rc, 414(GI)
B\8\(GI,CH,RY)
gh-1 gold hull and VI+IX 2 T65gh-1,
internode-1 B\7\(CH,RY)
d-1 daikoku dwarf VI+IX 2 E-17=T65d- H-80(HK)
1,B\7\(GI)
B\6\(RY)
ri verticillate rachis VI+IX 2 T65ri,
B\3\(RY)
nl-1 neck leaf-1 VI+IX 2 E11=T65nl-1, H-69(HK)
B\8\(GI,CH,RY)
gl-1 glabrous leaf blade VI+IX 2 E10=T65gl- H-90(HK)
1,B\8\(GI)
B\10(RY)
Dn-1 Dense panicle-1 VII 1 T65 Dn-1,
B\8\(RY)
I-Bf Inhibitor for brown V 1 T65I-Bf,
furrows B\3\(RY)
d-27(d- bunketsuto dwarf VIII 9 T65d-27, (CH)
t)
la 'lazy' growth habit VIII 9 E13=T65Eb,B1
4(CH,RY)
bc-1 brittle culm-1 XI 5 E9 T65 bc-1,
B\8\(GI)
B\10\(RY)
bl-1 brown leaf spot-1 X 8 T65 bl-1,
B\3\(RY)
dl(lop) drooping leaf XI 5 T65dl,
B\5\(RY)
Hg Hairy glume XII T65 Hg,
B\8\(RY)
pgl pale green leaf 7 T65pgl,
B\8\(RY)
fgl(fl) faded green leaf 7 T65pgl,
B\8\(RY)
Ef-2 Earliness-2 7 T65Ef-2,
B\10(RY)
An-4(t) Awn-4 12 T65An-4,
B\10\(RY)
wx & Rc glutinous endosperm I&IV 6&10 E18=T65wx,Rc
and Red pericarp (B\12\F\3\xB\7
\F\3\)F\3\
(GI,CH)
lg&g-1 liguleless and long II&IV 11&10 E21=T65lg,g-1,
sterile lemmas-1 (B\7\F\3\xB\7\
F\3\)F\3\
(GI,CH)
gl-1 & glabrous leaf and hull VI+IX& 2&9 E20=T65gl,la
la and `lazy` growth VIII (B\7\F\3\xB\7\
habit F\3\)F\3\
(GI,CH)
nl-1 & neck leaf-1 and VI+IX& 2&5 E19=T65nl,bc-1
bc-1 brittle culm-1 XI (B\7\F\3\xB\7\
F\3\)F\3\
(GI,CH)
==============================================================================
Reference: Oka and Morishima (1974), Sano and Oka (1977), Tsai (1973),
Institution: National Institute of Genetics, Mishima, 411 Japan
============================================================================
Gene symbol Character Linkage Chro- Strain Donor
group mosome
============================================================================
Ef-1+(=ef-1) Recessive allele VIII 9 T65e Taichung 65
Ef-1a Early flowering T65Ea(A3) Tatung-tsailai
Ca.10 days
Ef-1b do. T65Eb(B96) Bozu 5go
Ef-1gamma do. T65Egamma(I123) gamma-rayed to
T65e
Ef-1X do. T65EX(I190) X-rayed to T65e
ma-Ef-1+ Emphatic gene IV 10 T65e-ema(A4-58) Tatung-tsailai
of E-locus
mb-Ef-1+ do. T65e-emb(B172) Bozu 5go
m*-Ef-1a do. T65Ea-em(A4\7\) Ea X em
m*-Ef-1b do. T65Eb-3m(B20) Eb X em
m*-Ef-1gamma do. T65Egamma-em Egamma X em
m*-Ef-1X do. T65EX-em EX X em
============================================================================
*Including ma and mb.
Reference : Tsai and Oka (1970), Tsai (1973, 1980, 1984).
Institution : Department of Agronomy, National Chung-Hsing University,
Taichung, Republic of China.
============================================================================
Gene Character Chromosomes Strain
symbol involved
============================================================================
gl-1 glabrous leaf blade 2-3 E42=T65Tr34.gl
nl-1 neck leaf-1 2-6 E43=T65Tr52.nl
(T65nl.bc X T65Tr52)F\3\
g-1 long sterile lemmas-1 5-10 E44=T65Tr44.g-1
(T65lg.g X T65Tr44)F\3\
============================================================================
Reference: Sano and Oka (1977)
Institution: National Institute of Genetics, Mishima, 411 Japan
A. Isogenic lines of Fujisaka 5go
Strains: ZTR (113905-020906)...Pi-zt, Pi-i
ZTS (113905-020907)...Pi-i
Backcross and Donor: B\4\, Morak Sepilai (Pi-zt)
Reference: Yokoo (1983)
Institution: National Institute of Agrobiological Resources,
Yatabe, Tsukuba, 305 Japan.
B. Isogenic lines of Nipponbare
============================================================================
Gene Linkage Chromo- Strain Back- Donor
symbol group some crosses
============================================================================
Pi-i I 6 Kanto-IL6,IL7,IL13 B\4\ Todoroki-wase
Pi-z I 6 Kanto-IL4,IL5 B\4\ Ou-287 go
Pi-zt Kanto-IL18,IL19 B\4\ T3B205
Pi-ta2 VII 1 Kanto-IL10,IL11 B\4\ Etsunan-109 go
Pi-k VIII 9 Kanto-IL2,IL3,IL12 B\4\ Kusabue
Pi-b X 8 Kanto-IL1,IL14 B\4\ BL-1
============================================================================
Reference: Horisue et al. (1984)
Institutition: National Agriculture Research Center, Yatabe, Tsukuba,
305 Japan.
Most varieties of O. glaberrima have red pericapr and sensitive to
photoperiod. Pnats with colorless pericarp and non-sensitive to photoperiod
were selected from W492 (non-sensitive) X C7432 (white grain) and other
16 crosses, in 1970. The data showed that white grain was monogenic
recessive. From the bulk of selected plants, a strain, GMS, was selected,
and was used for EMS (0.05M, 5 hrs) treatment in 1974. Mutants were
selected from ca. 7,000 M\2\ plants in 1976, and the final selection was
made in 1979 (M\4\). The mutant genes listed were found to be allelic to
the respective genes of O. sativa. In addition, round kernel (E108),
spotted leaf (E111), and early-flowering (E112) were obtained, for which
the genes remain unidentified.
============================================================================
Gene Character Linkage Chromo- Strain Remarks
symbol group some
============================================================================
wx glutinous endosperm I 6 E106=GMS-2 EMS induced M\4\
lg liguleless II 11 E109=GMS-48-1 do.
Rc+ White pericarp IV 10 E105=GMS-1 Selection from
hybrid
d-1 daikoku dwarf VI+IX 2 E107=GMS-11-2 EMS induced M\4\
bc-1 brittle culm-1 XI 5 E110=GMS-85-4 do.
============================================================================
Reference: Oka (1977), Sano (1977,1979).
Institution: National Institute of Genetics, Mishima, 411 Japan.