BFO:0000000	\N	\N	"" []	BFO:0000000	"" []	175525	\N	\N	bfo	0	OGMS	entity	entity
BFO:0000005	\N	\N	"" []	BFO:0000005	"" []	175526	\N	\N	bfo	0	OGMS	generically dependent continuant	generically dependent continuant
BFO:0000003	\N	\N	"" []	BFO:0000005	"" []	199217	\N	\N	bfo	0	OGMS	occurrent	generically dependent continuant
BFO:0000010	\N	\N	"" []	BFO:0000010	"" []	175527	\N	\N	bfo	0	OGMS	role	role
BFO:0000008	\N	\N	"" []	BFO:0000010	"" []	199218	\N	\N	bfo	0	OGMS	temporal region	role
BFO:0000012	\N	\N	"" []	BFO:0000012	"" []	175528	\N	\N	bfo	0	OGMS	capability	capability
BFO:0000009	\N	\N	"" []	BFO:0000012	"" []	199219	\N	\N	bfo	0	OGMS	two-dimensional spatial region	capability
BFO:0000041	\N	\N	"" []	BFO:0000041	"" []	175529	\N	\N	bfo	0	OGMS	material entity	material entity
BFO:0000004	\N	\N	"b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])" []	BFO:0000041	"" []	199220	\N	\N	bfo	0	OGMS	independent continuant	material entity
BFO:0000042	\N	\N	"" []	BFO:0000042	"" []	175530	\N	\N	bfo	0	OGMS	fiat object part	fiat object part
BFO:0000041	BFO:0000042	\N	"" []	BFO:0000042	"" []	242504	\N	\N	bfo	1	OGMS	material entity	fiat object part
BFO:0000043	\N	\N	"" []	BFO:0000043	"" []	175531	\N	\N	bfo	0	OGMS	object	object
BFO:0000041	BFO:0000043	\N	"" []	BFO:0000043	"" []	242505	\N	\N	bfo	1	OGMS	material entity	object
BFO:0000044	\N	\N	"" []	BFO:0000044	"" []	175532	\N	\N	bfo	0	OGMS	object aggregate	object aggregate
BFO:0000041	BFO:0000044	\N	"" []	BFO:0000044	"" []	242506	\N	\N	bfo	1	OGMS	material entity	object aggregate
BFO:0000052	\N	\N	"" []	BFO:0000052	"" []	175533	\N	\N	bfo	0	OGMS	processual entity	processual entity
BFO:0000002	\N	\N	"" []	BFO:0000052	"" []	199221	\N	\N	bfo	0	OGMS	continuant	processual entity
BFO:0000053	\N	\N	"" []	BFO:0000053	"" []	175534	\N	\N	bfo	0	OGMS	fiat process part	fiat process part
BFO:0000052	BFO:0000053	\N	"" []	BFO:0000053	"" []	242507	\N	\N	bfo	1	OGMS	processual entity	fiat process part
BFO:0000058	\N	\N	"" []	BFO:0000058	"" []	175535	\N	\N	bfo	0	OGMS	process	process
BFO:0000052	BFO:0000058	\N	"" []	BFO:0000058	"" []	242508	\N	\N	bfo	1	OGMS	processual entity	process
BFO:0000062	\N	\N	"" []	BFO:0000062	"" []	175536	\N	\N	bfo	0	OGMS	process aggregate	process aggregate
BFO:0000052	BFO:0000062	\N	"" []	BFO:0000062	"" []	242509	\N	\N	bfo	1	OGMS	processual entity	process aggregate
BFO:0000076	\N	\N	"" []	BFO:0000076	"" []	175537	\N	\N	bfo	0	OGMS	defined class	defined class
OGMS:0000014	\N	\N	"A representation that is either the output of a clinical history taking or a physical examination or an image finding, or some combination thereof." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000014	"A representation that is either the output of a clinical history taking or a physical examination or an image finding, or some combination thereof." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175538	\N	\N	ogms	0	OGMS	clinical finding	clinical finding
IAO:0000027	\N	\N	"Data is an information entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements." []	OGMS:0000014	"A representation that is either the output of a clinical history taking or a physical examination or an image finding, or some combination thereof." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199222	\N	\N	ogms	0	OGMS	data item	clinical finding
OGMS:0000015	\N	\N	"A series of statements representing health-relevant qualities of a patient and of a patient's family." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000015	"A series of statements representing health-relevant qualities of a patient and of a patient's family." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175539	\N	\N	ogms	0	OGMS	clinical history	clinical history
OGMS:0000014	OGMS:0000015	\N	"A representation that is either the output of a clinical history taking or a physical examination or an image finding, or some combination thereof." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000015	"A series of statements representing health-relevant qualities of a patient and of a patient's family." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242472	\N	\N	ogms	1	OGMS	clinical finding	clinical history
OGMS:0000016	\N	\N	"A representation of clinically significant bodily components, dispositions, and/or bodily processes of a human being that is inferred from relevant clinical findings." [http://code.google.com/p/ogms/issues/detail?id=18, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000016	"A representation of clinically significant bodily components, dispositions, and/or bodily processes of a human being that is inferred from relevant clinical findings." [http://code.google.com/p/ogms/issues/detail?id=18, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175540	\N	\N	ogms	0	OGMS	clinical picture	clinical picture
IAO:0000027	\N	\N	"Data is an information entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements." []	OGMS:0000016	"A representation of clinically significant bodily components, dispositions, and/or bodily processes of a human being that is inferred from relevant clinical findings." [http://code.google.com/p/ogms/issues/detail?id=18, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199223	\N	\N	ogms	0	OGMS	data item	clinical picture
OGMS:0000017	\N	\N	"A representation of an image that supports an inference to an assertion about some quality of a patient." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000017	"A representation of an image that supports an inference to an assertion about some quality of a patient." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175541	\N	\N	ogms	0	OGMS	image finding	image finding
OGMS:0000014	OGMS:0000017	\N	"A representation that is either the output of a clinical history taking or a physical examination or an image finding, or some combination thereof." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000017	"A representation of an image that supports an inference to an assertion about some quality of a patient." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242473	\N	\N	ogms	1	OGMS	clinical finding	image finding
OGMS:0000018	\N	\N	"A representation of a quality of a specimen that is the output of a laboratory test and that can support an inference to an assertion about some quality of the patient." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000018	"A representation of a quality of a specimen that is the output of a laboratory test and that can support an inference to an assertion about some quality of the patient." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175542	\N	\N	ogms	0	OGMS	laboratory finding	laboratory finding
OGMS:0000014	OGMS:0000018	\N	"A representation that is either the output of a clinical history taking or a physical examination or an image finding, or some combination thereof." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000018	"A representation of a quality of a specimen that is the output of a laboratory test and that can support an inference to an assertion about some quality of the patient." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242474	\N	\N	ogms	1	OGMS	clinical finding	laboratory finding
OGMS:0000019	\N	\N	"A representation of a quality of a patient that is (1) recorded by a clinician because the quality is hypothesized to be of clinical significance and (2) refers to qualities obtaining in the patient prior to their becoming detectable in a clinical history taking or physical examination." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000019	"A representation of a quality of a patient that is (1) recorded by a clinician because the quality is hypothesized to be of clinical significance and (2) refers to qualities obtaining in the patient prior to their becoming detectable in a clinical history taking or physical examination." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175543	\N	\N	ogms	0	OGMS	preclinical finding	preclinical finding
IAO:0000027	\N	\N	"Data is an information entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements." []	OGMS:0000019	"A representation of a quality of a patient that is (1) recorded by a clinician because the quality is hypothesized to be of clinical significance and (2) refers to qualities obtaining in the patient prior to their becoming detectable in a clinical history taking or physical examination." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199224	\N	\N	ogms	0	OGMS	data item	preclinical finding
OGMS:0000020	\N	\N	"A quality of a patient that is observed by the patient or a processual entity experienced by the patient, either of which is hypothesized by the patient to be a realization of a disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000020	"A quality of a patient that is observed by the patient or a processual entity experienced by the patient, either of which is hypothesized by the patient to be a realization of a disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175544	\N	\N	ogms	0	OGMS	symptom	symptom
BFO:0000076	\N	\N	"" []	OGMS:0000020	"A quality of a patient that is observed by the patient or a processual entity experienced by the patient, either of which is hypothesized by the patient to be a realization of a disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199225	\N	\N	ogms	0	OGMS	defined class	symptom
OGMS:0000022	\N	\N	"A quality of a patient that is (a) a deviation from clinical normality that exists in virtue of the realization of a disease and (b) is observable." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000022	"A quality of a patient that is (a) a deviation from clinical normality that exists in virtue of the realization of a disease and (b) is observable." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175545	\N	\N	ogms	0	OGMS	manifestation of a disease	manifestation of a disease
BFO:0000007	\N	\N	"A process is an entity that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity during the time it occurs." []	OGMS:0000022	"A quality of a patient that is (a) a deviation from clinical normality that exists in virtue of the realization of a disease and (b) is observable." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199226	\N	\N	ogms	0	OGMS	process	manifestation of a disease
OGMS:0000023	\N	\N	"A (combination of) quality(ies) of an organism determined by the interaction of its genetic make-up and environment that differentiates specific instances of a species from other instances of the same species." [http://code.google.com/p/ogms/issues/detail?id=19, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000023	"A (combination of) quality(ies) of an organism determined by the interaction of its genetic make-up and environment that differentiates specific instances of a species from other instances of the same species." [http://code.google.com/p/ogms/issues/detail?id=19, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175546	\N	\N	ogms	0	OGMS	phenotype	phenotype
BFO:0000007	\N	\N	"A process is an entity that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity during the time it occurs." []	OGMS:0000023	"A (combination of) quality(ies) of an organism determined by the interaction of its genetic make-up and environment that differentiates specific instances of a species from other instances of the same species." [http://code.google.com/p/ogms/issues/detail?id=19, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199227	\N	\N	ogms	0	OGMS	process	phenotype
OGMS:0000024	\N	\N	"A quality of a patient, a material entity that is part of a patient, or a processual entity that a patient participates in, any one of which is observed in a physical examination and is deemed by the clinician to be of clinical significance." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000024	"A quality of a patient, a material entity that is part of a patient, or a processual entity that a patient participates in, any one of which is observed in a physical examination and is deemed by the clinician to be of clinical significance." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175547	\N	\N	ogms	0	OGMS	sign	sign
BFO:0000076	\N	\N	"" []	OGMS:0000024	"A quality of a patient, a material entity that is part of a patient, or a processual entity that a patient participates in, any one of which is observed in a physical examination and is deemed by the clinician to be of clinical significance." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199228	\N	\N	ogms	0	OGMS	defined class	sign
OGMS:0000025	\N	\N	"A manifestation of a disease that is detectable in a clinical history taking or physical examination." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000025	"A manifestation of a disease that is detectable in a clinical history taking or physical examination." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175548	\N	\N	ogms	0	OGMS	clinical manifestation of a disease	clinical manifestation of a disease
OGMS:0000022	OGMS:0000025	\N	"A quality of a patient that is (a) a deviation from clinical normality that exists in virtue of the realization of a disease and (b) is observable." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000025	"A manifestation of a disease that is detectable in a clinical history taking or physical examination." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242475	\N	\N	ogms	1	OGMS	manifestation of a disease	clinical manifestation of a disease
OGMS:0000026	\N	\N	"A manifestation of a disease that exists prior to the time at which it would be detected in a clinical history taking or physical examination, if the patient were to present to a clinician. A realization of a disease that exists prior to its becoming detectable in a clinical history taking or physical examination." [http://code.google.com/p/ogms/issues/detail?id=8, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000026	"A manifestation of a disease that exists prior to the time at which it would be detected in a clinical history taking or physical examination, if the patient were to present to a clinician. A realization of a disease that exists prior to its becoming detectable in a clinical history taking or physical examination." [http://code.google.com/p/ogms/issues/detail?id=8, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175549	\N	\N	ogms	0	OGMS	preclinical manifestation of a disease	preclinical manifestation of a disease
OGMS:0000022	OGMS:0000026	\N	"A quality of a patient that is (a) a deviation from clinical normality that exists in virtue of the realization of a disease and (b) is observable." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000026	"A manifestation of a disease that exists prior to the time at which it would be detected in a clinical history taking or physical examination, if the patient were to present to a clinician. A realization of a disease that exists prior to its becoming detectable in a clinical history taking or physical examination." [http://code.google.com/p/ogms/issues/detail?id=8, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242476	\N	\N	ogms	1	OGMS	manifestation of a disease	preclinical manifestation of a disease
OGMS:0000027	\N	\N	"A clinically abnormal phenotype." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000027	"A clinically abnormal phenotype." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175550	\N	\N	ogms	0	OGMS	clinical phenotype	clinical phenotype
OGMS:0000023	OGMS:0000027	\N	"A (combination of) quality(ies) of an organism determined by the interaction of its genetic make-up and environment that differentiates specific instances of a species from other instances of the same species." [http://code.google.com/p/ogms/issues/detail?id=19, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000027	"A clinically abnormal phenotype." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242477	\N	\N	ogms	1	OGMS	phenotype	clinical phenotype
OGMS:0000028	\N	\N	"A clinically abnormal phenotype that is characteristic of a single disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000028	"A clinically abnormal phenotype that is characteristic of a single disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175551	\N	\N	ogms	0	OGMS	disease phenotype	disease phenotype
OGMS:0000023	OGMS:0000028	\N	"A (combination of) quality(ies) of an organism determined by the interaction of its genetic make-up and environment that differentiates specific instances of a species from other instances of the same species." [http://code.google.com/p/ogms/issues/detail?id=19, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000028	"A clinically abnormal phenotype that is characteristic of a single disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242478	\N	\N	ogms	1	OGMS	phenotype	disease phenotype
OGMS:0000029	\N	\N	"A physical sign in which a non-zero value is standardly considered to be an indication that the organism is alive." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000029	"A physical sign in which a non-zero value is standardly considered to be an indication that the organism is alive." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175552	\N	\N	ogms	0	OGMS	vital sign	vital sign
OGMS:0000024	OGMS:0000029	\N	"A quality of a patient, a material entity that is part of a patient, or a processual entity that a patient participates in, any one of which is observed in a physical examination and is deemed by the clinician to be of clinical significance." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000029	"A physical sign in which a non-zero value is standardly considered to be an indication that the organism is alive." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242479	\N	\N	ogms	1	OGMS	sign	vital sign
OGMS:0000030	\N	\N	"A disposition in an organism that constitutes an increased risk of the organism's subsequently developing the disease X." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000030	"A disposition in an organism that constitutes an increased risk of the organism's subsequently developing the disease X." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175553	\N	\N	ogms	0	OGMS	predisposition to disease of type X	predisposition to disease of type X
BFO:0000009	\N	\N	"" []	OGMS:0000030	"A disposition in an organism that constitutes an increased risk of the organism's subsequently developing the disease X." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199229	\N	\N	ogms	0	OGMS	two-dimensional spatial region	predisposition to disease of type X
OGMS:0000031	\N	\N	"A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism." [http://code.google.com/p/ogms/issues/detail?id=34, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000031	"A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism." [http://code.google.com/p/ogms/issues/detail?id=34, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175554	\N	\N	ogms	0	OGMS	disease	disease
BFO:0000009	\N	\N	"" []	OGMS:0000031	"A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism." [http://code.google.com/p/ogms/issues/detail?id=34, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199230	\N	\N	ogms	0	OGMS	two-dimensional spatial region	disease
OGMS:0000032	\N	\N	"" []	OGMS:0000032	"" []	175555	\N	\N	ogms	0	OGMS	homeostasis	homeostasis
BFO:0000009	\N	\N	"" []	OGMS:0000032	"" []	199231	\N	\N	ogms	0	OGMS	two-dimensional spatial region	homeostasis
OGMS:0000033	\N	\N	"A predisposition to disease of type X whose physical basis is a constitutional abnormality in an organism's genome. This abnormality is the physical basis for the increased risk of acquiring the disease X." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000033	"A predisposition to disease of type X whose physical basis is a constitutional abnormality in an organism's genome. This abnormality is the physical basis for the increased risk of acquiring the disease X." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175556	\N	\N	ogms	0	OGMS	genetic predisposition to disease of type X	genetic predisposition to disease of type X
OGMS:0000030	OGMS:0000033	\N	"A disposition in an organism that constitutes an increased risk of the organism's subsequently developing the disease X." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000033	"A predisposition to disease of type X whose physical basis is a constitutional abnormality in an organism's genome. This abnormality is the physical basis for the increased risk of acquiring the disease X." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242480	\N	\N	ogms	1	OGMS	predisposition to disease of type X	genetic predisposition to disease of type X
OGMS:0000034	\N	\N	"A disease whose physical basis is an acquired genetic disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000034	"A disease whose physical basis is an acquired genetic disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175557	\N	\N	ogms	0	OGMS	acquired genetic disease	acquired genetic disease
OGMS:0000031	OGMS:0000034	\N	"A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism." [http://code.google.com/p/ogms/issues/detail?id=34, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000034	"A disease whose physical basis is an acquired genetic disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242481	\N	\N	ogms	1	OGMS	disease	acquired genetic disease
OGMS:0000035	\N	\N	"A disease whose physical basis is a constitutional genetic disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000035	"A disease whose physical basis is a constitutional genetic disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175558	\N	\N	ogms	0	OGMS	constitutional genetic disease	constitutional genetic disease
OGMS:0000031	OGMS:0000035	\N	"A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism." [http://code.google.com/p/ogms/issues/detail?id=34, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000035	"A disease whose physical basis is a constitutional genetic disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242482	\N	\N	ogms	1	OGMS	disease	constitutional genetic disease
OGMS:0000037	\N	\N	"Homeostasis that is clinically abnormal for an organism of a given type and age in a given environment." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000037	"Homeostasis that is clinically abnormal for an organism of a given type and age in a given environment." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175559	\N	\N	ogms	0	OGMS	abnormal homeostasis	abnormal homeostasis
OGMS:0000032	OGMS:0000037	\N	"" []	OGMS:0000037	"Homeostasis that is clinically abnormal for an organism of a given type and age in a given environment." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242483	\N	\N	ogms	1	OGMS	homeostasis	abnormal homeostasis
OGMS:0000038	\N	\N	"Homeostasis of a type that is not clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000038	"Homeostasis of a type that is not clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175560	\N	\N	ogms	0	OGMS	normal homeostasis	normal homeostasis
OGMS:0000032	OGMS:0000038	\N	"" []	OGMS:0000038	"Homeostasis of a type that is not clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242484	\N	\N	ogms	1	OGMS	homeostasis	normal homeostasis
OGMS:0000039	\N	\N	"A quality which is an spatial arrangement or distribution of a(n) independent continuant(s) across a Three Dimensional Region." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000039	"A quality which is an spatial arrangement or distribution of a(n) independent continuant(s) across a Three Dimensional Region." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175561	\N	\N	ogms	0	OGMS	configuration	configuration
BFO:0000007	\N	\N	"A process is an entity that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity during the time it occurs." []	OGMS:0000039	"A quality which is an spatial arrangement or distribution of a(n) independent continuant(s) across a Three Dimensional Region." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199232	\N	\N	ogms	0	OGMS	process	configuration
OGMS:0000040	\N	\N	"A configuration which deviates in some way from a canonical configuration for a particular organism." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000040	"A configuration which deviates in some way from a canonical configuration for a particular organism." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175562	\N	\N	ogms	0	OGMS	pathological physical configuration	pathological physical configuration
OGMS:0000039	OGMS:0000040	\N	"A quality which is an spatial arrangement or distribution of a(n) independent continuant(s) across a Three Dimensional Region." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000040	"A configuration which deviates in some way from a canonical configuration for a particular organism." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242485	\N	\N	ogms	1	OGMS	configuration	pathological physical configuration
OGMS:0000045	\N	\N	"A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000045	"A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175563	\N	\N	ogms	0	OGMS	disorder	disorder
BFO:0000041	\N	\N	"" []	OGMS:0000045	"A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199233	\N	\N	ogms	0	OGMS	material entity	disorder
OGMS:0000046	\N	\N	"A disorder whose etiology involves (1) a modification to the patient's genomic DNA which leads to alterations in the normal expression pattern of the genome, but is (2) not a change in the nucleotide sequence." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000046	"A disorder whose etiology involves (1) a modification to the patient's genomic DNA which leads to alterations in the normal expression pattern of the genome, but is (2) not a change in the nucleotide sequence." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175564	\N	\N	ogms	0	OGMS	epigenetic disorder	epigenetic disorder
OGMS:0000045	OGMS:0000046	\N	"A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000046	"A disorder whose etiology involves (1) a modification to the patient's genomic DNA which leads to alterations in the normal expression pattern of the genome, but is (2) not a change in the nucleotide sequence." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242486	\N	\N	ogms	1	OGMS	disorder	epigenetic disorder
OGMS:0000047	\N	\N	"A disorder whose etiology involves an abnormality in the nucleotide sequence of an organism's genome." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000047	"A disorder whose etiology involves an abnormality in the nucleotide sequence of an organism's genome." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175565	\N	\N	ogms	0	OGMS	genetic disorder	genetic disorder
OGMS:0000045	OGMS:0000047	\N	"A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000047	"A disorder whose etiology involves an abnormality in the nucleotide sequence of an organism's genome." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242487	\N	\N	ogms	1	OGMS	disorder	genetic disorder
OGMS:0000050	\N	\N	"A genetic disorder acquired by a single cell in an organism that leads to a population of cells within the organism bearing the disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000050	"A genetic disorder acquired by a single cell in an organism that leads to a population of cells within the organism bearing the disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175566	\N	\N	ogms	0	OGMS	acquired genetic disorder	acquired genetic disorder
OGMS:0000047	OGMS:0000050	\N	"A disorder whose etiology involves an abnormality in the nucleotide sequence of an organism's genome." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000050	"A genetic disorder acquired by a single cell in an organism that leads to a population of cells within the organism bearing the disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242488	\N	\N	ogms	1	OGMS	genetic disorder	acquired genetic disorder
OGMS:0000045	OGMS:0000047	\N	"A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000050	"A genetic disorder acquired by a single cell in an organism that leads to a population of cells within the organism bearing the disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	606221	\N	\N	ogms	2	OGMS	disorder	acquired genetic disorder
OGMS:0000051	\N	\N	"A genetic disorder inherited during conception that is part of all cells in the organism." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000051	"A genetic disorder inherited during conception that is part of all cells in the organism." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175567	\N	\N	ogms	0	OGMS	constitutional genetic disorder	constitutional genetic disorder
OGMS:0000047	OGMS:0000051	\N	"A disorder whose etiology involves an abnormality in the nucleotide sequence of an organism's genome." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000051	"A genetic disorder inherited during conception that is part of all cells in the organism." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242489	\N	\N	ogms	1	OGMS	genetic disorder	constitutional genetic disorder
OGMS:0000045	OGMS:0000047	\N	"A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000051	"A genetic disorder inherited during conception that is part of all cells in the organism." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	606222	\N	\N	ogms	2	OGMS	disorder	constitutional genetic disorder
OGMS:0000055	\N	\N	"An interview in which a clinician elicits a clinical history from a patient or from a third party who is reporting on behalf of the patient." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000055	"An interview in which a clinician elicits a clinical history from a patient or from a third party who is reporting on behalf of the patient." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175568	\N	\N	ogms	0	OGMS	clinical history taking	clinical history taking
BFO:0000052	\N	\N	"" []	OGMS:0000055	"An interview in which a clinician elicits a clinical history from a patient or from a third party who is reporting on behalf of the patient." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199234	\N	\N	ogms	0	OGMS	processual entity	clinical history taking
OGMS:0000056	\N	\N	"A measurement assay that has as input a patient-derived specimen, and as output a result that represents a quality of the specimen." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000056	"A measurement assay that has as input a patient-derived specimen, and as output a result that represents a quality of the specimen." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175569	\N	\N	ogms	0	OGMS	laboratory test	laboratory test
BFO:0000052	\N	\N	"" []	OGMS:0000056	"A measurement assay that has as input a patient-derived specimen, and as output a result that represents a quality of the specimen." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199235	\N	\N	ogms	0	OGMS	processual entity	laboratory test
OGMS:0000057	\N	\N	"A sequence of acts of observing and measuring qualities of a patient performed by a clinician; measurements may occur with and without elicitation." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000057	"A sequence of acts of observing and measuring qualities of a patient performed by a clinician; measurements may occur with and without elicitation." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175570	\N	\N	ogms	0	OGMS	physical examination	physical examination
BFO:0000052	\N	\N	"" []	OGMS:0000057	"A sequence of acts of observing and measuring qualities of a patient performed by a clinician; measurements may occur with and without elicitation." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199236	\N	\N	ogms	0	OGMS	processual entity	physical examination
OGMS:0000059	\N	\N	"A process in an organism that leads to a subsequent disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000059	"A process in an organism that leads to a subsequent disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175571	\N	\N	ogms	0	OGMS	etiological process	etiological process
BFO:0000052	\N	\N	"" []	OGMS:0000059	"A process in an organism that leads to a subsequent disorder." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199237	\N	\N	ogms	0	OGMS	processual entity	etiological process
OGMS:0000060	\N	\N	"" []	OGMS:0000060	"" []	175572	\N	\N	ogms	0	OGMS	bodily process	bodily process
BFO:0000052	\N	\N	"" []	OGMS:0000060	"" []	199238	\N	\N	ogms	0	OGMS	processual entity	bodily process
OGMS:0000061	\N	\N	"A bodily process that is clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000061	"A bodily process that is clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175573	\N	\N	ogms	0	OGMS	pathological bodily process	pathological bodily process
OGMS:0000060	OGMS:0000061	\N	"" []	OGMS:0000061	"A bodily process that is clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	242490	\N	\N	ogms	1	OGMS	bodily process	pathological bodily process
OGMS:0000064	\N	\N	"A disease course that (a) does not terminate in a return to normal homeostasis and (b) would, absent intervention, fall within abnormal homeostatic range." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000064	"A disease course that (a) does not terminate in a return to normal homeostasis and (b) would, absent intervention, fall within abnormal homeostatic range." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175574	\N	\N	ogms	0	OGMS	chronic disease course	chronic disease course
OGMS:0000063	\N	\N	"" []	OGMS:0000064	"A disease course that (a) does not terminate in a return to normal homeostasis and (b) would, absent intervention, fall within abnormal homeostatic range." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199239	\N	\N	ogms	0	OGMS	disease course	chronic disease course
OGMS:0000065	\N	\N	"A disease course that (a) does not terminate in a return to normal homeostasis and (b) would, absent intervention, involve an increasing deviation from homeostasis." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000065	"A disease course that (a) does not terminate in a return to normal homeostasis and (b) would, absent intervention, involve an increasing deviation from homeostasis." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175575	\N	\N	ogms	0	OGMS	progressive disease course	progressive disease course
OGMS:0000063	\N	\N	"" []	OGMS:0000065	"A disease course that (a) does not terminate in a return to normal homeostasis and (b) would, absent intervention, involve an increasing deviation from homeostasis." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199240	\N	\N	ogms	0	OGMS	disease course	progressive disease course
OGMS:0000066	\N	\N	"A disease course that terminates in a return to normal homeostasis." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000066	"A disease course that terminates in a return to normal homeostasis." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175576	\N	\N	ogms	0	OGMS	transient disease course	transient disease course
OGMS:0000063	\N	\N	"" []	OGMS:0000066	"A disease course that terminates in a return to normal homeostasis." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199241	\N	\N	ogms	0	OGMS	disease course	transient disease course
OGMS:0000067	\N	\N	"" []	OGMS:0000067	"" []	175577	\N	\N	ogms	0	OGMS	undefined primitive terms	undefined primitive terms
BFO:0000000	\N	\N	"" []	OGMS:0000067	"" []	199242	\N	\N	ogms	0	OGMS	entity	undefined primitive terms
OGMS:0000069	\N	\N	"" []	OGMS:0000069	"" []	175578	\N	\N	ogms	0	OGMS	clinically abnormal	clinically abnormal
OGMS:0000067	OGMS:0000069	\N	"" []	OGMS:0000069	"" []	242491	\N	\N	ogms	1	OGMS	undefined primitive terms	clinically abnormal
OGMS:0000070	\N	\N	"" []	OGMS:0000070	"" []	175579	\N	\N	ogms	0	OGMS	physical basis	physical basis
OGMS:0000067	OGMS:0000070	\N	"" []	OGMS:0000070	"" []	242492	\N	\N	ogms	1	OGMS	undefined primitive terms	physical basis
OGMS:0000071	\N	\N	"" []	OGMS:0000071	"" []	175580	\N	\N	ogms	0	OGMS	realization	realization
OGMS:0000067	OGMS:0000071	\N	"" []	OGMS:0000071	"" []	242493	\N	\N	ogms	1	OGMS	undefined primitive terms	realization
OGMS:0000073	\N	\N	"The representation of a conclusion of diagnostic process." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000073	"The representation of a conclusion of diagnostic process." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175581	\N	\N	ogms	0	OGMS	diagnosis	diagnosis
IAO:0000027	\N	\N	"Data is an information entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements." []	OGMS:0000073	"The representation of a conclusion of diagnostic process." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199243	\N	\N	ogms	0	OGMS	data item	diagnosis
OGMS:0000074	\N	\N	"A value for a quality reported in a lab report and asserted by the testing lab or the kit manufacturer to be normal based on a statistical treatment of values from a reference population." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000074	"A value for a quality reported in a lab report and asserted by the testing lab or the kit manufacturer to be normal based on a statistical treatment of values from a reference population." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	175582	\N	\N	ogms	0	OGMS	normal value	normal value
BFO:0000005	\N	\N	"" []	OGMS:0000074	"A value for a quality reported in a lab report and asserted by the testing lab or the kit manufacturer to be normal based on a statistical treatment of values from a reference population." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	199244	\N	\N	ogms	0	OGMS	generically dependent continuant	normal value
OGMS:0000077	\N	\N	"TODO: Define, relate to disorder, and place in the OGMS hierarchy." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	OGMS:0000077	"TODO: Define, relate to disorder, and place in the OGMS hierarchy." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	175583	\N	\N	ogms	0	OGMS	pathological formation	pathological formation
BFO:0000041	\N	\N	"" []	OGMS:0000077	"TODO: Define, relate to disorder, and place in the OGMS hierarchy." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	199245	\N	\N	ogms	0	OGMS	material entity	pathological formation
OGMS:0000078	\N	\N	"An anatomical structure (FMA) is pathological whenever (1) it has come into being as a result of changes in some pre-existing canonical anatomical structure, (2) through processes other than the expression of the normal complement of genes of an organism of the given type, and (3) is predisposed to have health-related consequences for the organism in question manifested by symptoms and signs." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	OGMS:0000078	"An anatomical structure (FMA) is pathological whenever (1) it has come into being as a result of changes in some pre-existing canonical anatomical structure, (2) through processes other than the expression of the normal complement of genes of an organism of the given type, and (3) is predisposed to have health-related consequences for the organism in question manifested by symptoms and signs." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	175584	\N	\N	ogms	0	OGMS	pathological anatomical structure	pathological anatomical structure
BFO:0000041	\N	\N	"" []	OGMS:0000078	"An anatomical structure (FMA) is pathological whenever (1) it has come into being as a result of changes in some pre-existing canonical anatomical structure, (2) through processes other than the expression of the normal complement of genes of an organism of the given type, and (3) is predisposed to have health-related consequences for the organism in question manifested by symptoms and signs." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	199246	\N	\N	ogms	0	OGMS	material entity	pathological anatomical structure
OGMS:0000079	\N	\N	"TODO: Define, relate to disorder, and place in the OGMS hierarchy." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	OGMS:0000079	"TODO: Define, relate to disorder, and place in the OGMS hierarchy." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	175585	\N	\N	ogms	0	OGMS	portion of pathological body substance	portion of pathological body substance
BFO:0000041	\N	\N	"" []	OGMS:0000079	"TODO: Define, relate to disorder, and place in the OGMS hierarchy." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	199247	\N	\N	ogms	0	OGMS	material entity	portion of pathological body substance
OGMS:0000080	\N	\N	"A pathological bodily process in which a canonical anatomical structure becomes a pathological anatomical structure." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	OGMS:0000080	"A pathological bodily process in which a canonical anatomical structure becomes a pathological anatomical structure." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	175586	\N	\N	ogms	0	OGMS	pathological transformation	pathological transformation
OGMS:0000061	OGMS:0000080	\N	"A bodily process that is clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000080	"A pathological bodily process in which a canonical anatomical structure becomes a pathological anatomical structure." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	242494	\N	\N	ogms	1	OGMS	pathological bodily process	pathological transformation
OGMS:0000060	OGMS:0000061	\N	"" []	OGMS:0000080	"A pathological bodily process in which a canonical anatomical structure becomes a pathological anatomical structure." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	606223	\N	\N	ogms	2	OGMS	bodily process	pathological transformation
OGMS:0000081	\N	\N	"A pathological bodily process in which matter is reorganized in such a way as to give rise to new pathological formations which take the place of entities existing earlier." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	OGMS:0000081	"A pathological bodily process in which matter is reorganized in such a way as to give rise to new pathological formations which take the place of entities existing earlier." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	175587	\N	\N	ogms	0	OGMS	pathological derivation	pathological derivation
OGMS:0000061	OGMS:0000081	\N	"A bodily process that is clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000081	"A pathological bodily process in which matter is reorganized in such a way as to give rise to new pathological formations which take the place of entities existing earlier." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	242495	\N	\N	ogms	1	OGMS	pathological bodily process	pathological derivation
OGMS:0000060	OGMS:0000061	\N	"" []	OGMS:0000081	"A pathological bodily process in which matter is reorganized in such a way as to give rise to new pathological formations which take the place of entities existing earlier." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	606224	\N	\N	ogms	2	OGMS	bodily process	pathological derivation
OGMS:0000082	\N	\N	"TODO: Define." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	OGMS:0000082	"TODO: Define." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	175588	\N	\N	ogms	0	OGMS	pathological invasion	pathological invasion
OGMS:0000061	OGMS:0000082	\N	"A bodily process that is clinically abnormal." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000082	"TODO: Define." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	242496	\N	\N	ogms	1	OGMS	pathological bodily process	pathological invasion
OGMS:0000060	OGMS:0000061	\N	"" []	OGMS:0000082	"TODO: Define." [http://ontology.buffalo.edu/bio/ISMB/ISMB_Bio-ontologies.pdf]	606225	\N	\N	ogms	2	OGMS	bodily process	pathological invasion
OGMS:0000083	\N	\N	"TODO: Define." [http://code.google.com/p/ogms/issues/detail?id=26]	OGMS:0000083	"TODO: Define." [http://code.google.com/p/ogms/issues/detail?id=26]	175589	\N	\N	ogms	0	OGMS	physical examination finding	physical examination finding
OGMS:0000014	OGMS:0000083	\N	"A representation that is either the output of a clinical history taking or a physical examination or an image finding, or some combination thereof." [http://code.google.com/p/ogms/issues/detail?id=26, http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000083	"TODO: Define." [http://code.google.com/p/ogms/issues/detail?id=26]	242497	\N	\N	ogms	1	OGMS	clinical finding	physical examination finding
OGMS:0000084	\N	\N	"An aggregate of organisms of the same type." [http://code.google.com/p/ogms/issues/detail?id=33]	OGMS:0000084	"An aggregate of organisms of the same type." [http://code.google.com/p/ogms/issues/detail?id=33]	175590	\N	\N	ogms	0	OGMS	organism population	organism population
BFO:0000044	\N	\N	"" []	OGMS:0000084	"An aggregate of organisms of the same type." [http://code.google.com/p/ogms/issues/detail?id=33]	199248	\N	\N	ogms	0	OGMS	object aggregate	organism population
OGMS:0000085	\N	\N	"TODO: Define." [http://code.google.com/p/ogms/issues/detail?id=13]	OGMS:0000085	"TODO: Define." [http://code.google.com/p/ogms/issues/detail?id=13]	175591	\N	\N	ogms	0	OGMS	pain	pain
OGMS:0000020	OGMS:0000085	\N	"A quality of a patient that is observed by the patient or a processual entity experienced by the patient, either of which is hypothesized by the patient to be a realization of a disease." [http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf]	OGMS:0000085	"TODO: Define." [http://code.google.com/p/ogms/issues/detail?id=13]	242498	\N	\N	ogms	1	OGMS	symptom	pain
OGMS:0000086	\N	\N	"A pattern of signs and symptoms that typically co-occur." [http://code.google.com/p/ogms/issues/detail?id=32]	OGMS:0000086	"A pattern of signs and symptoms that typically co-occur." [http://code.google.com/p/ogms/issues/detail?id=32]	175592	\N	\N	ogms	0	OGMS	syndrome	syndrome
BFO:0000007	\N	\N	"A process is an entity that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity during the time it occurs." []	OGMS:0000086	"A pattern of signs and symptoms that typically co-occur." [http://code.google.com/p/ogms/issues/detail?id=32]	199249	\N	\N	ogms	0	OGMS	process	syndrome
OGMS:0000087	\N	\N	"An object aggregate consisting of an organism and all material entities located within the organism, overlapping the organism, or occupying sites formed in part by the organism." [http://code.google.com/p/ogms/issues/detail?id=3]	OGMS:0000087	"An object aggregate consisting of an organism and all material entities located within the organism, overlapping the organism, or occupying sites formed in part by the organism." [http://code.google.com/p/ogms/issues/detail?id=3]	175593	\N	\N	ogms	0	OGMS	extended organism	extended organism
BFO:0000044	\N	\N	"" []	OGMS:0000087	"An object aggregate consisting of an organism and all material entities located within the organism, overlapping the organism, or occupying sites formed in part by the organism." [http://code.google.com/p/ogms/issues/detail?id=3]	199250	\N	\N	ogms	0	OGMS	object aggregate	extended organism
OGMS:0000088	\N	\N	"A communication from a patient about something they perceive as being abnormal about their body or life." [http://code.google.com/p/ogms/issues/detail?id=12]	OGMS:0000088	"A communication from a patient about something they perceive as being abnormal about their body or life." [http://code.google.com/p/ogms/issues/detail?id=12]	175594	\N	\N	ogms	0	OGMS	patient symptom report	patient symptom report
IAO:0000030	\N	\N	"An information entity is an entity that represents information about some other entity.  For example, a measurement, a clustered data set." []	OGMS:0000088	"A communication from a patient about something they perceive as being abnormal about their body or life." [http://code.google.com/p/ogms/issues/detail?id=12]	199251	\N	\N	ogms	0	OGMS	information entity	patient symptom report
OGMS:0000089	\N	\N	"A structurally anomalous part of an organism acquired during fetal development and present at birth (but not necessarily hereditary) which is hypothesized to be harmful for the organism." [http://code.google.com/p/ogms/issues/detail?id=28]	OGMS:0000089	"A structurally anomalous part of an organism acquired during fetal development and present at birth (but not necessarily hereditary) which is hypothesized to be harmful for the organism." [http://code.google.com/p/ogms/issues/detail?id=28]	175595	\N	\N	ogms	0	OGMS	congenital malformation	congenital malformation
BFO:0000041	\N	\N	"" []	OGMS:0000089	"A structurally anomalous part of an organism acquired during fetal development and present at birth (but not necessarily hereditary) which is hypothesized to be harmful for the organism." [http://code.google.com/p/ogms/issues/detail?id=28]	199252	\N	\N	ogms	0	OGMS	material entity	congenital malformation
OGMS:0000090	\N	\N	"A processual entity whose completion is hypothesized (by a healthcare provider) to alleviate the signs and symptoms associated with a disorder" [http://code.google.com/p/ogms/issues/detail?id=35]	OGMS:0000090	"A processual entity whose completion is hypothesized (by a healthcare provider) to alleviate the signs and symptoms associated with a disorder" [http://code.google.com/p/ogms/issues/detail?id=35]	175596	\N	\N	ogms	0	OGMS	treatment	treatment
BFO:0000052	\N	\N	"" []	OGMS:0000090	"A processual entity whose completion is hypothesized (by a healthcare provider) to alleviate the signs and symptoms associated with a disorder" [http://code.google.com/p/ogms/issues/detail?id=35]	199253	\N	\N	ogms	0	OGMS	processual entity	treatment
OGMS:0000091	\N	\N	"A processual entity during which a patient participating in a disease course gradually returns to participating in a canonical life course. " [http://code.google.com/p/ogms/issues/detail?id=35]	OGMS:0000091	"A processual entity during which a patient participating in a disease course gradually returns to participating in a canonical life course. " [http://code.google.com/p/ogms/issues/detail?id=35]	175597	\N	\N	ogms	0	OGMS	convalescence	convalescence
BFO:0000052	\N	\N	"" []	OGMS:0000091	"A processual entity during which a patient participating in a disease course gradually returns to participating in a canonical life course. " [http://code.google.com/p/ogms/issues/detail?id=35]	199254	\N	\N	ogms	0	OGMS	processual entity	convalescence
OGMS:0000092	\N	\N	"A processual entity which has as parts all the processes in which a given organism is participant." [http://code.google.com/p/ogms/issues/detail?id=38]	OGMS:0000092	"A processual entity which has as parts all the processes in which a given organism is participant." [http://code.google.com/p/ogms/issues/detail?id=38]	175598	\N	\N	ogms	0	OGMS	life course	life course
BFO:0000052	\N	\N	"" []	OGMS:0000092	"A processual entity which has as parts all the processes in which a given organism is participant." [http://code.google.com/p/ogms/issues/detail?id=38]	199255	\N	\N	ogms	0	OGMS	processual entity	life course
OGMS:0000093	\N	\N	"A hypothesis about the course of a disease." [http://code.google.com/p/ogms/issues/detail?id=35]	OGMS:0000093	"A hypothesis about the course of a disease." [http://code.google.com/p/ogms/issues/detail?id=35]	175599	\N	\N	ogms	0	OGMS	prognosis	prognosis
IAO:0000027	\N	\N	"Data is an information entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements." []	OGMS:0000093	"A hypothesis about the course of a disease." [http://code.google.com/p/ogms/issues/detail?id=35]	199256	\N	\N	ogms	0	OGMS	data item	prognosis
OGMS:0000094	\N	\N	"a disease course with a rapid onset but typical unfolding of signs and symptoms after this rapid onset." [http://code.google.com/p/ogms/wiki/Meeting_notes_20100513]	OGMS:0000094	"a disease course with a rapid onset but typical unfolding of signs and symptoms after this rapid onset." [http://code.google.com/p/ogms/wiki/Meeting_notes_20100513]	175600	\N	\N	ogms	0	OGMS	acute disease course	acute disease course
OGMS:0000063	\N	\N	"" []	OGMS:0000094	"a disease course with a rapid onset but typical unfolding of signs and symptoms after this rapid onset." [http://code.google.com/p/ogms/wiki/Meeting_notes_20100513]	199257	\N	\N	ogms	0	OGMS	disease course	acute disease course
OGMS:0000095	\N	\N	"A process which is a response by an organism's tissues that is generally identified by swelling or localized pain" [http://code.google.com/p/ogms/wiki/Meeting_notes_20100513]	OGMS:0000095	"A process which is a response by an organism's tissues that is generally identified by swelling or localized pain" [http://code.google.com/p/ogms/wiki/Meeting_notes_20100513]	175601	\N	\N	ogms	0	OGMS	inflammation process	inflammation process
BFO:0000052	\N	\N	"" []	OGMS:0000095	"A process which is a response by an organism's tissues that is generally identified by swelling or localized pain" [http://code.google.com/p/ogms/wiki/Meeting_notes_20100513]	199258	\N	\N	ogms	0	OGMS	processual entity	inflammation process
OGMS:0000096	\N	\N	"A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000096	"A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	175602	\N	\N	ogms	0	OGMS	health care process	health care process
BFO:0000052	\N	\N	"" []	OGMS:0000096	"A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	199259	\N	\N	ogms	0	OGMS	processual entity	health care process
OGMS:0000097	\N	\N	"A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role.  The health care provider role and patient are realized during the health care encounter" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000097	"A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role.  The health care provider role and patient are realized during the health care encounter" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	175603	\N	\N	ogms	0	OGMS	health care encounter	health care encounter
OGMS:0000096	OGMS:0000097	\N	"A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000097	"A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role.  The health care provider role and patient are realized during the health care encounter" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	242499	\N	\N	ogms	1	OGMS	health care process	health care encounter
OGMS:0000098	\N	\N	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000098	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	175604	\N	\N	ogms	0	OGMS	hospitalization	hospitalization
OGMS:0000097	OGMS:0000098	\N	"A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role.  The health care provider role and patient are realized during the health care encounter" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000098	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	242500	\N	\N	ogms	1	OGMS	health care encounter	hospitalization
OGMS:0000096	OGMS:0000097	\N	"A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000098	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	606226	\N	\N	ogms	2	OGMS	health care process	hospitalization
OGMS:0000099	\N	\N	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000099	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	175605	\N	\N	ogms	0	OGMS	outpatient encounter	outpatient encounter
OGMS:0000097	OGMS:0000099	\N	"A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role.  The health care provider role and patient are realized during the health care encounter" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000099	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	242501	\N	\N	ogms	1	OGMS	health care encounter	outpatient encounter
OGMS:0000096	OGMS:0000097	\N	"A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000099	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	606227	\N	\N	ogms	2	OGMS	health care process	outpatient encounter
OGMS:0000100	\N	\N	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000100	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	175606	\N	\N	ogms	0	OGMS	inpatient encounter	inpatient encounter
OGMS:0000097	OGMS:0000100	\N	"A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role.  The health care provider role and patient are realized during the health care encounter" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000100	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	242502	\N	\N	ogms	1	OGMS	health care encounter	inpatient encounter
OGMS:0000096	OGMS:0000097	\N	"A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000100	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	606228	\N	\N	ogms	2	OGMS	health care process	inpatient encounter
OGMS:0000101	\N	\N	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000101	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	175607	\N	\N	ogms	0	OGMS	ED encounter	ED encounter
OGMS:0000097	OGMS:0000101	\N	"A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role.  The health care provider role and patient are realized during the health care encounter" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000101	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	242503	\N	\N	ogms	1	OGMS	health care encounter	ED encounter
OGMS:0000096	OGMS:0000097	\N	"A social process that has at least one human participant and that includes as parts the treatment, diagnosis, or prevention of disease or injury--or the following of instructions of another human for treatment, diagnosis, or prevention--of a participant in the process" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	OGMS:0000101	"TODO" [http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6]	606229	\N	\N	ogms	2	OGMS	health care process	ED encounter
OGMS:0000102	\N	\N	"A part of an organism that has undergone a change in structural integrity and has a higher chance of dysfunction or causing dysfunction in another structure." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/ca0ad373f27774c5]	OGMS:0000102	"A part of an organism that has undergone a change in structural integrity and has a higher chance of dysfunction or causing dysfunction in another structure." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/ca0ad373f27774c5]	175608	\N	\N	ogms	0	OGMS	injury	injury
BFO:0000041	\N	\N	"" []	OGMS:0000102	"A part of an organism that has undergone a change in structural integrity and has a higher chance of dysfunction or causing dysfunction in another structure." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/ca0ad373f27774c5]	199260	\N	\N	ogms	0	OGMS	material entity	injury
OGMS:0000103	\N	\N	"A planned process that has the objective to reduce the risk of acquiring one or more disorders." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/e42bde79218ee34e]	OGMS:0000103	"A planned process that has the objective to reduce the risk of acquiring one or more disorders." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/e42bde79218ee34e]	175609	\N	\N	ogms	0	OGMS	prophylaxis	prophylaxis
BFO:0000052	\N	\N	"" []	OGMS:0000103	"A planned process that has the objective to reduce the risk of acquiring one or more disorders." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/e42bde79218ee34e]	199261	\N	\N	ogms	0	OGMS	processual entity	prophylaxis
OGMS:0000104	\N	\N	"An interpretive process that has as input a clinical picture of a given patient and as output an assertion to the effect that the patient has a disease, disorder, or syndrome of a certain type, or none of these." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/2a7008f311fac766/e7de486c94dfd82e]	OGMS:0000104	"An interpretive process that has as input a clinical picture of a given patient and as output an assertion to the effect that the patient has a disease, disorder, or syndrome of a certain type, or none of these." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/2a7008f311fac766/e7de486c94dfd82e]	175610	\N	\N	ogms	0	OGMS	diagnostic process	diagnostic process
BFO:0000052	\N	\N	"" []	OGMS:0000104	"An interpretive process that has as input a clinical picture of a given patient and as output an assertion to the effect that the patient has a disease, disorder, or syndrome of a certain type, or none of these." [http://groups.google.com/group/ogms-discuss/browse_thread/thread/2a7008f311fac766/e7de486c94dfd82e]	199262	\N	\N	ogms	0	OGMS	processual entity	diagnostic process
OGMS:0000105	\N	\N	"A part of a disease course that occurs after an incomplete remission and that is similar to earlier parts of the disease course." [http://code.google.com/p/ogms/issues/detail?id=73]	OGMS:0000105	"A part of a disease course that occurs after an incomplete remission and that is similar to earlier parts of the disease course." [http://code.google.com/p/ogms/issues/detail?id=73]	175611	\N	\N	ogms	0	OGMS	relapse	relapse
BFO:0000052	\N	\N	"" []	OGMS:0000105	"A part of a disease course that occurs after an incomplete remission and that is similar to earlier parts of the disease course." [http://code.google.com/p/ogms/issues/detail?id=73]	199263	\N	\N	ogms	0	OGMS	processual entity	relapse
OGMS:0000106	\N	\N	"A part of a disease course that includes a temporary convalescense." [http://code.google.com/p/ogms/issues/detail?id=73]	OGMS:0000106	"A part of a disease course that includes a temporary convalescense." [http://code.google.com/p/ogms/issues/detail?id=73]	175612	\N	\N	ogms	0	OGMS	remission	remission
BFO:0000052	\N	\N	"" []	OGMS:0000106	"A part of a disease course that includes a temporary convalescense." [http://code.google.com/p/ogms/issues/detail?id=73]	199264	\N	\N	ogms	0	OGMS	processual entity	remission
